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| Registros recuperados: 77 | |
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| Huret, Martin; Petitgas, Pierre; Struski, Caroline; Leger, Fabien; Sourisseau, Marc; Lazure, Pascal. |
| Overexploitation and climate change are increasingly causing unanticipated changes in marine ecosystems, such as higher variability in fish recruitment and shifts in species distribution, pressing for developing fisheries oceanography. In the meantime, operational oceanography rapidly progresses and its products become easy to access to a large community, among them fisheries scientists. Multiyear oceanographic reanalyses (hindcasts) were identified has a priority product by the ICES WG on Operational Oceanographic Products for Fisheries and Environment (WGOOFE). We performed a 37 years hindcast (1972-2008) run with a coupled physical-biogeochemical model (ECO-MARS3D) over the Bay of Biscay, using realistic meteorological and run-off forcing. We first... |
| Tipo: Text |
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| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00023/13432/10442.pdf |
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| Politikos, Dimitrios; Huret, Martin; Petitgas, Pierre. |
| Modelling of fish movement behaviour within a heterogeneous marine environment is a challenging but also key issue for understanding the effect of environmental factors and climatic change on fish processes (growth, distribution, mortality, reproduction). Fish movement models have the capability to encompass the combined effect of environment and empirical knowledge of fish individuals as energy requirements, known preys and predators, swimming capacities into a unified framework. Following an Individual Based Model (IBM) approach, a fish movement model has been developed to simulate the active movement of adult anchovy in the Bay of Biscay (BoB) in response to the spatio-temporal variations of both biotic and abiotic factors, as well as its internal... |
| Tipo: Text |
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| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00176/28709/27161.pdf |
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| Politikos, Dimitrios; Huret, Martin; Petitgas, Pierre. |
| Adult anchovies in the Bay of Biscay perform north to south migration from late winter to early summer for spawning. However, what triggers and drives the geographic shift of the population remains unclear and poorly understood. An individual-based fish model has been implemented to explore the potential mechanisms that control anchovy's movement routes toward its spawning habitats. To achieve this goal, two fish movement behaviors – gradient detection through restricted area search and kinesis – simulated fish response to its dynamic environment. A bioenergetics model was used to represent individual growth and reproduction along the fish trajectory. The environmental forcing (food, temperature) of the model was provided by a coupled... |
| Tipo: Text |
Palavras-chave: Individual-based model; Behavioral movement; Dynamic Energy Budget; Anchovy; Bay of Biscay. |
| Ano: 2015 |
URL: http://archimer.ifremer.fr/doc/00273/38446/36868.pdf |
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| Huret, Martin; Sourisseau, Marc; Petitgas, Pierre; Struski, Caroline; Leger, Fabien; Lazure, Pascal. |
| Multiple year oceanographic simulations (hindcast) are identified as a priority oceanography product for fisheries and environment studies since they provide a unique continuous long-term dataset allowing integrated assessment of the ocean state and evolution. We performed a 37 year (1972–2008) hindcast run with a coupled physical–biogeochemical model in the Bay of Biscay. The coupled model and the hindcast configuration are described. A model skill assessment is performed with a large set of in-situ data. Average seasonal currents show major circulation patterns over the shelf. Among tracers, temperature and salinity have the best agreement, ahead of nitrates and silicates, chlorophyll, and finally phosphates and ammonium. For chlorophyll, improved... |
| Tipo: Text |
Palavras-chave: Physical-biogeochemical model; Hindcast; Skill assessment; Environmental indices; Seasonal pattern; Interannual variability; Fisheries oceanography; Bay of Biscay. |
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00114/22538/20237.pdf |
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| Huret, Martin; Petitgas, Pierre; Bourriau, Paul; Grellier, Patrick. |
| The objective of the study is a better understanding of recruitment variability in anchovy population. An Individual Based Model (IBM) is being developed for the full life cycle of anchovy. The early life stages are presented on this poster. The model is tested in a 1D-vertical framework for validation of the vertical distribution of modelled eggs and larvae against in-situ data. The dynamic Energy Budget (DEB) theory is the biological baseline for individual growth. We test its ability to simulate the observed growth curves between years with contrasted temperatures. |
| Tipo: Text |
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| Ano: 2011 |
URL: http://archimer.ifremer.fr/doc/00054/16508/14022.pdf |
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| Petitgas, Pierre; Renard, Didier; Desassis, Nicolas; Huret, Martin; Romagnan, Jean-baptiste; Doray, Mathieu; Woillez, Mathieu; Rivoirard, Jacques. |
| This paper presents a novel application of the geostatistical multivariate method known as min–max autocorrelation factors (MAFs) for analysing fisheries survey data in a space–time context. The method was used to map essential fish habitats and evaluate the variability in time of their occupancy. Research surveys at sea on marine fish stocks have been undertaken for several decades now. The data are time series of yearly maps of fish density, making it possible to analyse the space–time variability in fish spatial distributions. Space–time models are key to addressing conservation issues requiring the characterization of variability in habitat maps over time. Here, the variability in fisheries survey data series is decomposed in space and time to address... |
| Tipo: Text |
Palavras-chave: MAF; Space-time; Habitat; Mapping; Sardine; Bay of Biscay. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00599/71157/69915.pdf |
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| Petitgas, Pierre; Alheit, Juergen; Peck, Myron A.; Raab, Kristina; Irigoien, Xabier; Huret, Martin; Van Der Kooij, Jeroen; Pohlmann, Thomas; Wagner, Carola; Zarraonaindia, Iratxe; Dickey-collas, Mark. |
| The abundance and spatial occupation of European anchovy Engraulis encrasicolus have increased in the North Sea since the mid-1990s. We use a cross-disciplinary approach combining genetics, transport modelling, survey time series analyses and physical oceanographic modelling to investigate 3 hypotheses on the reasons for this change. Evidence from connectivity studies suggests that the population of North Sea anchovy is separate from that in the Bay of Biscay. The recruitment pulses observed in survey data fit a life cycle which includes spawning in early summer and larval development in late summer. This also supports the concept of population expansion originating from local remnant population(s). In terms of growth physiology, suitable thermal windows... |
| Tipo: Text |
Palavras-chave: Climate variability; Small pelagic fish; Regime shift; Temperature; Anchovy; North Sea. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00060/17140/14638.pdf |
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| Gatti, Paul; Cominassi, Louise; Duhamel, Erwan; Grellier, Patrick; Le Delliou, Herve; Le Mestre, Sophie; Petitgas, Pierre; Rabiller, Manuella; Spitz, Jerome; Huret, Martin. |
| There is a growing interest in monitoring body condition of marine organisms in the context of the ecosystem approach to fisheries and global change. Fish condition is under the influence of environmental variability on seasonal scale, but also on longer timescales. It represents a good indicator of habitat quality or individual fitness, and is also a relevant parameter to evaluate energy transfer through the trophic chain. However, the sources of variability in fish condition need to be accurately understood and the significance of existing indices has to be correctly assessed. Here, we measured the energy density, a precise and global indicator of fish bioenergetic condition, for anchovy (Engraulis encrasicolus) and sardine (Sardina pilchardus) in the... |
| Tipo: Text |
Palavras-chave: Energy density; Calorimetry; Small pelagic fish; Engraulis encrasicolus; Sardina pilchardus; Northeast Atlantic. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00416/52754/53615.pdf |
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| Lett, Christophe; Ayata, Sakina-dorothee; Huret, Martin; Irisson, Jean-olivier. |
| Climate may act on the dispersal and connectivity of marine populations through changes in the oceanic circulation and temperature, and by modifying species' prey and predator distributions. As dispersal and connectivity remain difficult to assess in situ, a first step in studying the effects of climate change can be achieved using biophysical models. To date, only a few biophysical models have been used for this purpose. Here we review these studies and also include results from other recent modelling efforts. We show that increased sea temperature, a major change expected under climate warming, may impact dispersal and connectivity patterns via changes in reproductive phenology (e.g., shift in the spawning season), transport (e.g., reduced pelagic larval... |
| Tipo: Text |
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| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00031/14176/11522.pdf |
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| Lazure, Pascal; Huret, Martin; Gohin, Francis; Menesguen, Alain; Lecornu, Fabrice; Le Traon, Pierre-yves; Thomin, Pascale; Jegou, P.; Baraer, F.; Corre, Gilles; Louazel, Stephanie; Equipe projet PREVIMER. |
| Sommaire * Météo et débits des fleuves.....2 * Caractéristiques des masses d’eau côtières..............5 * Production biologique............11 * Rappel des objectifs du bulletin PREVIMER..................13 * Les moyens d’observations et de prévisions de l’état des mers côtières...........................13 * Glossaire..................................15 |
| Tipo: Text |
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| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00242/35367/33866.pdf |
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| Lazure, Pascal; Huret, Martin; Gohin, Francis; Sourisseau, Marc; Saulquin, Bertrand; Lecornu, Fabrice; De Roeck, Yann-herve; Legrand, Jacques; Thomin, Pascale; Aoustin, Yannick; Jegou, P.; Baraer, F.; Le Stum, M.; Louazel, Stephanie; Equipe projet PREVIMER. |
| Sommaire * Météo, états de mer et débits des fleuves.....................2 * Caractéristiques des masses d’eau côtières..............6 * Production biologique............11 * Les faits marquants................12 * Rappel des objectifs du bulletin PREVIMER..................13 * Les moyens d’observations et de prévisions de l’état des mers côtières...........................13 * Glossaire..................................15 |
| Tipo: Text |
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| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/00242/35360/33860.pdf |
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| Dambrine, Chloe; Woillez, Mathieu; Huret, Martin; De Pontual, Helene. |
| Fish habitats sustain essential functions for fish to complete their life cycle, such as feeding, growing and spawning. Conservation is crucial to maintain fish populations and their exploitation. Since 2013, the spawning stock biomass of the northern stock of European seabass (Dicentrarchus labrax) has been in a worrying state. A series of low recruitments with a persistently high level of fishing has been blamed, raising concerns about the processes involved in seabass reproduction and settlement in nurseries. Here, we characterise seabass spawning areas along the French Atlantic coast using vessel monitoring system (VMS) data. A non‐linear geostatistical approach was applied, from 2008 to 2014, to detect locations where seabass aggregate for spawning.... |
| Tipo: Text |
Palavras-chave: Bay of Biscay; Bayesian spatio‐temporal modelling; Dicentrarchus labrax; English Channel; European sea bass; Non‐linear geostatistics; Spawning grounds. |
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00668/77997/80218.pdf |
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| Perrot, Laurie; Gohin, Francis; Ruiz-pino, Diana; Lampert, Luis; Huret, Martin; Dessier, Aurelie; Malestroit, Pascale; Dupuy, Christine; Bourriau, Paul. |
| Coccolithophore blooms occur regularly from April to June in the Bay of Biscay where they have been observed for many years from ocean-colour imagery thanks to the ability of their calcite plates to scatter light. They are easily depicted on interpolated images of non-algal Suspended Particulate Matter (SPM) derived from satellite reflectance data in May, at the time of the PELGAS (PELagique GAScogne) annual surveys. Over the springs 2012 to 2015, the PELGAS surveys provided in-situ data on the turbidity throughout the water column and on the hydrological environment prevailing during the blooms in the vicinity of the continental shelf break. The satellite-derived SPM in the area of coccolithophore blooms was closely related to measured turbidity in the... |
| Tipo: Text |
Palavras-chave: Bay of Biscay; Ocean colour; Suspended particulate matter; Turbidity; Coccoliths; Stratification. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00416/52790/53689.pdf |
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| Huret, Martin; Vandromme, Pieter; Petitgas, Pierre; Pecquerie, Laure. |
| Connectivity during early life stages of pelagic fish, defined here by survival probability between spawning and early juvenile habitats, depends on a combination of sufficient food availability and low predator encounter along drift trajectories. For anchovy in the Bay of Biscay, larval transport experiments throughout the spawning season suggest accumulation of early juveniles in the offshore area of the southern Bay, as well as retention over the mid-shelf at mid-latitude. However, late summer-early autumn surveys suggest presence of juveniles only in the former region. From this observation, we set up a bioenergetic individual based model to test for the effect of food availability on survival patterns. The model couples a Lagrangian transport module... |
| Tipo: Text |
Palavras-chave: Connectivity; Larval IBM; Bioenergetics; Zooplankton; Bay of Biscay; European anchovy. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00105/21655/19237.pdf |
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| Petitgas, Pierre; Ulrich, Clara; Auber, Arnaud; Gourguet, Sophie; Huret, Martin; Mazurais, David; Pernet, Fabrice; Pouvreau, Stephane; Richard, Marion; Servili, Arianna; Thebaud, Olivier; Zambonino Infante, Jose-luis. |
| Tipo: Text |
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| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00657/76942/78148.pdf |
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| Dambrine, Chloe; Huret, Martin; Woillez, Mathieu; Pecquerie, Laure; Allal, Francois; Servili, Arianna; De Pontual, Helene. |
| The European seabass (Dicentrarchus labrax) is a species of particular ecological and economic importance. Stock assessments have recently revealed the worrying state of the “Northern stock”, probably due to overfishing and a series of poor recruitments. The extent to which these poor recruitments are due to environmental variability is difficult to assess, as the processes driving the seabass life cycle are poorly known. Here we investigate how food availability and temperature may affect the growth and survival of wild seabass at the individual scale. To this end, we developed a bioenergetics model based on the Dynamic Energy Budget (DEB) theory. We applied it to seabass population of the Northeast Atlantic region (Bay of Biscay – English Channel area)... |
| Tipo: Text |
Palavras-chave: Dicentrarchus labrax Northeast Atlantic Dynamic Energy Budget theory Growth; Starvation Early-life stages. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00612/72397/71341.pdf |
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| Rochette, Sebastien; Huret, Martin; Rivot, Etienne; Le Pape, Olivier. |
| For many marine fish species, recruitment is strongly related to larval survival and dispersal to nursery areas. Simulating larval drift should help assessing the sensitivity of recruitment variability to early life history. An individual-based model (IBM) coupled to a hydrodynamic model was used to simulate common sole larval supply from spawning areas to coastal and estuarine nursery grounds at the population scale in the eastern Channel on a 14-yr time series, from 1991 to 2004. The IBM allowed each particle released to be transported by currents from the hydrodynamic model, to grow with temperature, to migrate vertically giving stage development, and possibly to die according to drift duration, representing the life history from spawning to... |
| Tipo: Text |
Palavras-chave: Eastern Channel; Hydrodynamic model; Individual-based model; Larval supply; Nursery grounds; Recruitment variability; Solea solea. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00085/19598/17236.pdf |
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| Huret, Martin; Dadou, Isabelle; Dumas, Franck; Lazure, Pascal; Garcon, Véronique. |
| A coupled three-dimensional physical-biogeochemical model was developed in order to simulate the ecological functioning of the Rio de la Plata estuary and plume. The biogeochemical model reproduces the nitrogen cycle between five compartments: dissolved inorganic nitrogen, phytoplankton, zooplankton, detritus and dissolved organic nitrogen. The coupling is tested in seasonal climatological configurations and for the particular year 1999. The circulation is forced with Parana and Uruguay rivers discharges, NCEP wind and tide. The biogeochemical model includes loads of inorganic and organic nitrogen from both rivers. The model reproduces the correct tidal amplitudes in the estuary, as well as the most outstanding features of the observed horizontal and... |
| Tipo: Text |
Palavras-chave: Rio de la Plata; SeaWiFS; Primary production; Chlorophyll; River plumes; Biogeochemical modelling; Physical. |
| Ano: 2005 |
URL: http://archimer.ifremer.fr/doc/2005/publication-334.pdf |
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| Registros recuperados: 77 | |
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